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okapidemo
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base: decozo:cc0b79f5d16dba806d30e43e920bf65d983953eb
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decozo:master
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compare: decozo:8447582bbc7735876381682bbfefae3badc5f373
Branches Tags
decozo:master

5 Commits
cc0b79f5d1 ... 8447582bbc

Author SHA1 Message Date
Bas Kloosterman 8447582bbc Add initial docker-compose file
11 months ago
Bas Kloosterman f7bd097470 Update docker-compose copy bin folder
11 months ago
Bas Kloosterman 81876ae051 Cleanup whitebox server code
11 months ago
Bas Kloosterman b76b8aebae Cleanup dvza server code
11 months ago
Bas Kloosterman bc161904d8 Update gitignore to ignore database and certs
11 months ago
5 changed files with 79 additions and 157 deletions
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Show Stats
  1. 4
      .gitignore
  2. 1
      Dockerfile.wbx
  3. 36
      docker-compose.yaml
  4. 87
      dvzaservice/srv.go
  5. 108
      whiteboxservice/srv.go

4
.gitignore vendored
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@ -1 +1,3 @@
node_modules
node_modules
data/data.db
certs

1
Dockerfile.wbx
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@ -29,6 +29,7 @@ WORKDIR /
COPY ./whiteboxservice/assets /assets
COPY ./whiteboxservice/templates /templates
COPY ./whiteboxservice/bin /bin
COPY --from=build /app/bin/wbx ./wbx
RUN adduser -D nonroot

36
docker-compose.yaml
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@ -0,0 +1,36 @@
version: '3.0'
services:
okapi_his:
image: src.whiteboxsystems.nl/decozo/okapidemo/his
container_name: okapi_his
restart: always
environment:
EXT_ADDR: "https://okapi_his:8084"
volumes:
- "./his/data:/data"
- "./his/certs:/certs"
ports:
- 8084:8084
okapi_wbx:
image: src.whiteboxsystems.nl/decozo/okapidemo/whitebox
container_name: okapi_wbx
restart: always
environment:
EXT_ADDR: "okapi_wbx:8888"
BIN_FOLDER: "/wbxbin"
volumes:
- "./wbx/data:/data"
- "./wbx/certs:/certs"
ports:
- 8085:8085
okapi_dvza:
image: src.whiteboxsystems.nl/decozo/okapidemo/whitebox
container_name: okapi_dvza
restart: always
environment:
EXT_ADDR: "okapi_dvza:9999"
volumes:
- "./dvza/data:/data"
- "./dvza/certs:/certs"
ports:
- 9095:9095

87
dvzaservice/srv.go
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@ -54,7 +54,7 @@ func (srv *UIService) init() {
r.Use(srv.Authenticate)
r.GET("/", func(c *gin.Context) {
c.Redirect(301, "/ui")
c.Redirect(http.StatusMovedPermanently, "/ui")
})
r.GET("/ui", srv.GetIndex)
r.GET("/ui/*page", srv.GetIndex)
@ -76,14 +76,14 @@ func (srv *UIService) GetConnection(c *gin.Context) {
connID := c.Param("connID")
connection := &sharedmodel.Connection{}
srv.data.Where("id = ?", connID).Find(&connection)
c.JSON(200, connection)
c.JSON(http.StatusOK, connection)
}
func (srv *UIService) GetSubscriptions(c *gin.Context) {
connID := c.Param("connID")
serviceID := c.Param("serviceID")
serviceConfig := &sharedmodel.ServiceConfig{}
srv.data.Preload("Service").Preload("Subscriptions").Where("connection_id = ? and id = ?", connID, serviceID).Find(&serviceConfig)
c.JSON(200, serviceConfig)
c.JSON(http.StatusOK, serviceConfig)
}
func (srv *UIService) GetPatient(c *gin.Context) {
@ -100,11 +100,17 @@ func (srv *UIService) GetPatient(c *gin.Context) {
err := serviceConfig.FetchProtocol.UnmarshalConfig(&protoconfig)
log.Println(err, protoconfig)
if err != nil {
c.AbortWithStatus(http.StatusBadRequest)
return
}
err = patient.GetProtocolMeta(&protometa)
log.Println(err, protometa)
if err != nil {
c.AbortWithStatus(http.StatusBadRequest)
return
}
url := fmt.Sprintf("%v?id=%v", protoconfig["url"], protometa["patientID"])
@ -122,7 +128,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
resp, err := client.Do(req)
if err != nil {
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
@ -135,84 +141,21 @@ func (srv *UIService) GetPatient(c *gin.Context) {
}
func (srv *UIService) Authenticate(c *gin.Context) {
// authHeader := c.Request.Header.Get("Authorization")
// log.Printf("authHeader: %v", authHeader)
// if authHeader != "1111" {
// c.Status(401)
// c.Abort()
// }
// Maybe authenticate user
}
func (srv *UIService) GetConnections(c *gin.Context) {
connections := []*sharedmodel.Connection{}
srv.data.Preload("Services").Preload("Services.Service").Preload("Services.Subscriptions").Find(&connections)
c.JSON(200, connections)
c.JSON(http.StatusOK, connections)
}
func (srv *UIService) GetRegistrations(c *gin.Context) {
registrations := []*sharedmodel.Registration{}
srv.data.Where("status = ?", sharedmodel.RegistrationStatusPending).Find(&registrations)
c.JSON(200, registrations)
c.JSON(http.StatusOK, registrations)
}
// func (srv *UIService) GetSystems(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
// func (srv *UIService) GetPatients(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
// func (srv *UIService) GetPatient(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
func NewUIServer(addr string) *UIService {
cert := loadCert()
srv := &UIService{srv: &http.Server{

108
whiteboxservice/srv.go
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@ -57,7 +57,7 @@ func (srv *UIService) init() {
r.Use(srv.Authenticate)
r.GET("/", func(c *gin.Context) {
c.Redirect(301, "/ui")
c.Redirect(http.StatusMovedPermanently, "/ui")
})
r.GET("/ui", srv.GetIndex)
r.GET("/ui/*page", srv.GetIndex)
@ -66,8 +66,6 @@ func (srv *UIService) init() {
r.GET("/api/connections/:connID/:serviceID", srv.GetSubscriptions)
r.GET("/api/connections/:connID/:serviceID/:patientID", srv.GetPatient)
r.GET("/api/registrations", srv.GetRegistrations)
// r.GET("/api/systems/:sysid/patients", srv.GetPatients)
// r.GET("/api/systems/:sysid/patients/:patid", srv.GetPatient)
srv.inited = true
}
@ -79,14 +77,14 @@ func (srv *UIService) GetConnection(c *gin.Context) {
connID := c.Param("connID")
connection := &sharedmodel.Connection{}
srv.data.Where("id = ?", connID).Find(&connection)
c.JSON(200, connection)
c.JSON(http.StatusOK, connection)
}
func (srv *UIService) GetSubscriptions(c *gin.Context) {
connID := c.Param("connID")
serviceID := c.Param("serviceID")
serviceConfig := &sharedmodel.ServiceConfig{}
srv.data.Preload("Service").Preload("Subscriptions").Where("connection_id = ? and id = ?", connID, serviceID).Find(&serviceConfig)
c.JSON(200, serviceConfig)
c.JSON(http.StatusOK, serviceConfig)
}
func (srv *UIService) GetPatient(c *gin.Context) {
@ -96,7 +94,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
patient := &sharedmodel.Subscription{}
serviceConfig := &sharedmodel.ServiceConfig{}
if err := srv.data.Preload("FetchProtocol").Preload("FetchProtocol.AuthConfig").Preload("Service").Where("connection_id = ? and id = ?", connID, serviceID).Find(&serviceConfig).Error; err != nil {
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
srv.data.Where("service_config_id = ? and id = ?", serviceID, patientID).Find(&patient)
@ -106,16 +104,21 @@ func (srv *UIService) GetPatient(c *gin.Context) {
err := serviceConfig.FetchProtocol.UnmarshalConfig(&protoconfig)
log.Println(err, protoconfig)
if err != nil {
c.AbortWithStatus(http.StatusBadRequest)
return
}
err = patient.GetProtocolMeta(&protometa)
log.Println(err, protometa)
if err != nil {
c.AbortWithStatus(http.StatusBadRequest)
return
}
url := fmt.Sprintf("%v/%v/%v", protoconfig["url"], "patients", protometa["patientID"])
req, _ := http.NewRequest("GET", url, nil)
// req.Header.Set("Authorization", serviceConfig.FetchProtocol.AuthConfig.Raw)
client := &http.Client{
Transport: &http.Transport{
@ -129,7 +132,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
resp, err := client.Do(req)
if err != nil {
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
@ -142,7 +145,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
sin, err := cmd.StdinPipe()
if err != nil {
log.Println("[ediviewer] Failed to open stdin pipe:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
defer sin.Close()
@ -150,7 +153,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
serr, err := cmd.StderrPipe()
if err != nil {
log.Println("[ediviewer] Failed to open stderr pipe:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
defer serr.Close()
@ -158,14 +161,14 @@ func (srv *UIService) GetPatient(c *gin.Context) {
sout, err := cmd.StdoutPipe()
if err != nil {
log.Println("[ediviewer] Failed to open stdout pipe:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
defer sout.Close()
if err := cmd.Start(); err != nil {
log.Println("[ediviewer] Failed to start:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
return
}
@ -176,7 +179,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
defer wg.Done()
if _, err := io.Copy(sin, resp.Body); err != nil {
log.Println("[ediviewer] Error reading EDIFACT:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
}
}()
@ -184,7 +187,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
defer wg.Done()
if _, err := io.Copy(c.Writer, sout); err != nil {
log.Println("[ediviewer] Error output EDIFACT:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
}
}()
@ -192,7 +195,7 @@ func (srv *UIService) GetPatient(c *gin.Context) {
defer wg.Done()
if _, err := io.Copy(os.Stderr, serr); err != nil {
log.Println("[ediviewer] Error stderr EDIFACT:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
}
}()
@ -200,89 +203,26 @@ func (srv *UIService) GetPatient(c *gin.Context) {
if err := cmd.Wait(); err != nil {
log.Println("[ediviewer] Failed:", err)
c.AbortWithError(500, err)
c.AbortWithError(http.StatusInternalServerError, err)
}
}
func (srv *UIService) Authenticate(c *gin.Context) {
// authHeader := c.Request.Header.Get("Authorization")
// log.Printf("authHeader: %v", authHeader)
// if authHeader != "1111" {
// c.Status(401)
// c.Abort()
// }
// Maybe authenticate user
}
func (srv *UIService) GetConnections(c *gin.Context) {
connections := []*sharedmodel.Connection{}
srv.data.Preload("Services").Preload("Services.Service").Preload("Services.Subscriptions").Find(&connections)
c.JSON(200, connections)
c.JSON(http.StatusOK, connections)
}
func (srv *UIService) GetRegistrations(c *gin.Context) {
registrations := []*sharedmodel.Registration{}
srv.data.Where("status = ?", sharedmodel.RegistrationStatusPending).Find(&registrations)
c.JSON(200, registrations)
c.JSON(http.StatusOK, registrations)
}
// func (srv *UIService) GetSystems(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
// func (srv *UIService) GetPatients(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
// func (srv *UIService) GetPatient(c *gin.Context) {
// id := c.Param("id")
// for _, p := range patients {
// if p.PatientID == id {
// f, err := os.Open(path.Join("./data/patients", p.EDI))
// if err != nil {
// c.Error(err)
// return
// }
// io.Copy(c.Writer, f)
// return
// }
// }
// c.JSON(404, nil)
// }
func NewUIServer(addr string) *UIService {
cert := loadCert()

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