Your ROOT_URL in app.ini is https://src.whiteboxsystems.nl/ but you are visiting http://src.whiteboxsystems.nl/Whitebox/u-boot/src/commit/12c9e7d622319bac804e68998019ba21118bc355/configs/at91sam9n12ek_spiflash_defconfig You should set ROOT_URL correctly, otherwise the web may not work correctly.
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upstream u-boot with additional patches for our devices/boards: https://lists.denx.de/pipermail/u-boot/2017-March/282789.html (AXP crashes) ; Gbit ethernet patch for some LIME2 revisions ; with SPI flash support
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u-boot/configs/at91sam9n12ek_spiflash_defc...

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CONFIG_SYS_EXTRA_OPTIONS="AT91SAM9N12,SYS_USE_SPIFLASH"
CONFIG_ARM=y
CONFIG_TARGET_AT91SAM9N12EK=y