Your ROOT_URL in app.ini is https://src.whiteboxsystems.nl/ but you are visiting http://src.whiteboxsystems.nl/Whitebox/u-boot/src/commit/bbff84b3b0092d00db1b0b77ef9043b46991d791/configs/at91sam9x5ek_nandflash_defconfig You should set ROOT_URL correctly, otherwise the web may not work correctly.
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upstream u-boot with additional patches for our devices/boards: https://lists.denx.de/pipermail/u-boot/2017-March/282789.html (AXP crashes) ; Gbit ethernet patch for some LIME2 revisions ; with SPI flash support
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CONFIG_SYS_EXTRA_OPTIONS="AT91SAM9X5,SYS_USE_NANDFLASH"
CONFIG_ARM=y
CONFIG_TARGET_AT91SAM9X5EK=y