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662 lines
16 KiB
662 lines
16 KiB
package main
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import (
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"context"
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"crypto"
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"crypto/tls"
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"fmt"
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"io"
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"io/ioutil"
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"log"
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"net/http"
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"os"
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"path"
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"strconv"
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"strings"
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"time"
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"github.com/gin-gonic/gin"
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"google.golang.org/grpc/credentials"
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"gorm.io/gorm"
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"src.whiteboxsystems.nl/decozo/okapi"
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"src.whiteboxsystems.nl/decozo/okapidemo/cryptoutil"
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"src.whiteboxsystems.nl/decozo/okapidemo/his/model"
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"src.whiteboxsystems.nl/decozo/okapidemo/sharedmodel"
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)
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func loadCert() *tls.Certificate {
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_, err := os.Stat("certs/client.crt")
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if err != nil {
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_, _, certPem, keyPem, err := cryptoutil.GenCert("whitebox", "whitebox")
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if err != nil {
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panic(err)
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}
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if err != nil {
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panic(err)
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}
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if err := ioutil.WriteFile("certs/client.crt", []byte(certPem), 0600); err != nil {
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panic(err)
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}
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if err := ioutil.WriteFile("certs/client.key", []byte(keyPem), 0600); err != nil {
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panic(err)
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}
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}
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certificate, err := tls.LoadX509KeyPair("certs/client.crt", "certs/client.key")
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if err != nil {
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panic("Load client certification failed: " + err.Error())
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}
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return &certificate
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}
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func loadKeyPair() credentials.TransportCredentials {
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certificate := loadCert()
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tlsConfig := &tls.Config{
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ClientAuth: tls.RequestClientCert,
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Certificates: []tls.Certificate{*certificate},
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}
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return credentials.NewTLS(tlsConfig)
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}
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type HISServer struct {
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apiSrv *http.Server
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apiInited bool
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uiSrv *http.Server
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uiInited bool
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data *gorm.DB
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stopTasks chan struct{}
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clientCert tls.Certificate
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}
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func (srv *HISServer) LoadData(location string) error {
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var err error
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srv.data, err = model.GetDB(location)
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return err
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}
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func (srv *HISServer) Addr() string {
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if srv.apiSrv == nil {
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return ""
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}
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return srv.apiSrv.Addr
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}
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func (srv *HISServer) ListenAndServeAPI() error {
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if !srv.apiInited {
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srv.initAPI()
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}
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log.Printf("API Listening on %v\n", srv.apiSrv.Addr)
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return srv.apiSrv.ListenAndServeTLS("", "")
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}
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func (srv *HISServer) ListenAndServeUI() error {
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if !srv.uiInited {
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srv.initUI()
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}
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log.Printf("UI Listening on %v\n", srv.uiSrv.Addr)
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return srv.uiSrv.ListenAndServeTLS("", "")
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}
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func (srv *HISServer) ShutdownAPI(ctx context.Context) (error, error) {
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return srv.apiSrv.Shutdown(ctx), srv.uiSrv.Shutdown(ctx)
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}
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func (srv *HISServer) ShutdownUI(ctx context.Context) (error, error) {
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return srv.uiSrv.Shutdown(ctx), srv.uiSrv.Shutdown(ctx)
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}
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func (srv *HISServer) initAPI() {
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srv.apiInited = true
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r := srv.apiSrv.Handler.(*gin.Engine)
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r.Use(srv.Authenticate)
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r.GET("/external/api/patients/:id", srv.GetPatient)
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r.GET("/external/fhir/Patient", srv.GetFHIRPatient)
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}
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func (srv *HISServer) initUI() {
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srv.uiInited = true
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r := srv.uiSrv.Handler.(*gin.Engine)
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r.LoadHTMLGlob("templates/*")
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r.Static("/assets", "./assets")
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r.GET("/", func(c *gin.Context) {
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c.Redirect(301, "/ui")
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})
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r.GET("/ui", srv.GetIndex)
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r.GET("/ui/*page", srv.GetIndex)
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r.GET("/api/patients", srv.GetPatients)
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r.POST("/api/patients/:id/consent", srv.UpdateConsent)
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r.DELETE("/api/patients/:id/consent/:consentID", srv.DeleteConsent)
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r.GET("/api/serviceProviders", srv.GetServiceProviders)
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r.POST("/api/serviceProviders", srv.NewServiceProvider)
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r.POST("/api/serviceProviders/:id/activate", srv.ActivateServiceProvider)
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r.POST("/api/serviceProviders/:id/services", srv.ModService)
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r.GET("/api/serviceProviders/:id", srv.GetServiceProvider)
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r.GET("/api/services", srv.GetServices)
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r.POST("/api/services/:id/subscriptions", srv.UpdateSubscription)
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ticker := time.NewTicker(30 * time.Second)
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srv.stopTasks = make(chan struct{})
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srv.TaskSyncPatients()
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go func() {
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for {
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select {
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case <-ticker.C:
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srv.TaskSyncPatients()
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case <-srv.stopTasks:
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ticker.Stop()
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return
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}
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}
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}()
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}
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func (srv *HISServer) GetIndex(c *gin.Context) {
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c.HTML(http.StatusOK, "index.html", gin.H{})
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}
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func (srv *HISServer) diffPatients(a []*okapi.PatientRegistrationData, b []model.Patient) []model.Patient {
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mappedPatients := map[string]bool{}
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diff := []model.Patient{}
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for _, p := range a {
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mappedPatients[p.Id] = true
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}
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for _, p := range b {
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if _, ok := mappedPatients[p.ExternalId]; !ok {
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diff = append(diff, p)
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}
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}
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return diff
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}
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func (srv *HISServer) intersectPatients(a []*okapi.PatientRegistrationData, b []model.Patient) []model.Patient {
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mappedPatients := map[string]bool{}
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intersect := []model.Patient{}
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for _, p := range a {
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mappedPatients[p.Id] = true
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}
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for _, p := range b {
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if _, ok := mappedPatients[p.ExternalId]; ok {
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intersect = append(intersect, p)
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}
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}
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return intersect
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}
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func (srv *HISServer) TaskSyncPatients() {
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services := []model.Service{}
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srv.data.Preload("ServiceProvider").Preload("ServiceProvider.AuthConfig").Preload("Subscriptions").Find(&services)
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patients := []model.Patient{}
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srv.data.Find(&patients)
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mappedPatients := map[string]model.Patient{}
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for _, pat := range patients {
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mappedPatients[pat.ExternalId] = pat
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}
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for _, service := range services {
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mappedSubscriptions := map[string]model.Patient{}
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for _, sub := range service.Subscriptions {
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mappedSubscriptions[sub.ExternalId] = sub
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}
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activePatients := []model.Patient{}
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inactivePatients := []model.Patient{}
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for _, p := range patients {
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if _, ok := mappedSubscriptions[p.ExternalId]; ok {
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if service.SubscriptionPolicy == okapi.SubscriptionPolicy_optout {
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// Subscriptions means opted out, so unsubscribe
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inactivePatients = append(inactivePatients, p)
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} else {
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activePatients = append(activePatients, p)
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}
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} else {
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if service.SubscriptionPolicy == okapi.SubscriptionPolicy_optout {
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activePatients = append(activePatients, p)
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} else {
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inactivePatients = append(inactivePatients, p)
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}
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}
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}
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currentPatients, err := srv.listPatientRegistrations(service.ServiceProvider, &service)
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if err != nil {
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log.Println("Could not retrieve current subscriptions: %v", service.Name, err)
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continue
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}
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toSubscribe := srv.diffPatients(currentPatients, activePatients)
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if len(toSubscribe) > 0 {
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_, err := srv.subscribePatients(service.ServiceProvider, &service, activePatients)
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if err != nil {
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log.Println("active patients for optout (%v) err: %v", service.Name, err)
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} else {
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log.Printf("sync patients for %v: %v patients subscribed", service.Name, len(toSubscribe))
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}
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}
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toUnSubscribe := srv.intersectPatients(currentPatients, inactivePatients)
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if len(toUnSubscribe) > 0 {
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_, err = srv.unsubscribePatients(service.ServiceProvider, &service, inactivePatients)
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if err != nil {
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log.Println("inactive patients for optout (%v) err: %v", service.Name, err)
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} else {
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log.Printf("sync patients for %v: %v patients unsubscribed", service.Name, len(toUnSubscribe))
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}
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}
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if len(toSubscribe) == 0 && len(toUnSubscribe) == 0 {
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log.Println("Patient sync, nothing to sync")
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}
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}
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}
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func (srv *HISServer) Authenticate(c *gin.Context) {
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if !strings.HasPrefix(c.Request.RequestURI, "/external/") {
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return
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}
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raw := ""
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method := ""
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if len(c.Request.TLS.PeerCertificates) > 0 {
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jwk, err := cryptoutil.PublicKeyToJWK(c.Request.TLS.PeerCertificates[0].PublicKey)
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if err != nil {
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log.Printf("Error extracting public key JKW: %v", err)
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c.Status(401)
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c.Abort()
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return
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}
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rawBytes, _ := jwk.Thumbprint(crypto.SHA256)
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raw = fmt.Sprintf("%X", rawBytes)
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method = sharedmodel.AuthMethodDecozoMTLS
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} else {
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raw = c.Request.Header.Get("Authorization")
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method = sharedmodel.AuthMethodDecozoBearerToken
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}
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authConfig := &sharedmodel.AuthConfig{}
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if err := srv.data.Where("raw = ? and method = ?", raw, method).First(authConfig).Error; err != nil {
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c.Status(401)
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c.Abort()
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return
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}
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if strings.HasPrefix(c.Request.RequestURI, "/external/api") {
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service := &model.Service{}
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if srv.data.Where(
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"auth_config_id = ? and service_id like ?", authConfig.ID, "wbx:%",
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).First(service).Error == nil {
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c.Set("authenticatedService", service)
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return
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}
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}
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if strings.HasPrefix(c.Request.RequestURI, "/external/fhir") {
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service := &model.Service{}
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if srv.data.Where(
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"auth_config_id = ? and service_id like ?", authConfig.ID, "%:dvza",
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).First(service).Error == nil {
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c.Set("authenticatedService", service)
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return
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}
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}
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c.Status(401)
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c.Abort()
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}
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func (srv *HISServer) GetPatients(c *gin.Context) {
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patients := []model.Patient{}
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if err := srv.data.Preload("Consent").Find(&patients).Error; err != nil {
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c.AbortWithError(500, err)
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return
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}
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c.JSON(200, patients)
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}
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func (srv *HISServer) GetServiceProviders(c *gin.Context) {
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connections := []model.ServiceProvider{}
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if err := srv.data.Preload("AuthConfig").Preload("Services").Find(&connections).Error; err != nil {
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c.AbortWithError(500, err)
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return
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}
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c.JSON(200, connections)
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}
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func (srv *HISServer) GetServices(c *gin.Context) {
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services := []model.Service{}
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if err := srv.data.Preload("ServiceProvider").Preload("Subscriptions").Find(&services).Error; err != nil {
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c.AbortWithError(500, err)
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return
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}
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c.JSON(200, services)
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}
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func (srv *HISServer) GetServiceProvider(c *gin.Context) {
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connID := c.Param("id")
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connection := &model.ServiceProvider{}
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if err := srv.data.Where("id = ?", connID).Preload("AuthConfig").Preload("Services").Find(connection).Error; err != nil {
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c.AbortWithError(404, err)
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return
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}
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serviceMeta, err := srv.listServices(connection)
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if err != nil {
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c.AbortWithError(400, err)
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return
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}
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c.JSON(200, map[string]interface{}{"connection": connection, "meta": serviceMeta.Services})
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}
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func (srv *HISServer) ModService(c *gin.Context) {
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var payload struct {
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Active bool `json:"active"`
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Service string `json:"service"`
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}
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c.BindJSON(&payload)
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connID := c.Param("id")
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connection := &model.ServiceProvider{}
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if err := srv.data.Where("id = ?", connID).Preload("AuthConfig").Preload("Services").Find(connection).Error; err != nil {
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c.AbortWithError(404, err)
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return
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}
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var err error
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if payload.Active {
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err = srv.enableService(connection, payload.Service)
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} else {
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err = srv.disableService(connection, payload.Service)
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}
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if err != nil {
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log.Println("err: %v", err)
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c.AbortWithError(400, err)
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return
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}
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c.Status(200)
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}
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func (srv *HISServer) applyPolicy(sub bool, service *model.Service) bool {
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if service.SubscriptionPolicy == okapi.SubscriptionPolicy_optout {
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return !sub
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}
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return sub
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}
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func (srv *HISServer) UpdateConsent(c *gin.Context) {
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consent := &model.Consent{}
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c.BindJSON(consent)
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pId, _ := strconv.ParseUint(c.Param("id"), 10, 64)
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consent.PatientID = uint(pId)
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if consent.ID != 0 {
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srv.data.Save(consent)
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c.Status(200)
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} else {
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srv.data.Create(consent)
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c.Status(201)
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}
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}
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func (srv *HISServer) DeleteConsent(c *gin.Context) {
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consent := &model.Consent{}
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srv.data.Unscoped().Where("id = ? and patient_id = ?", c.Param("consentID"), c.Param("id")).Delete(consent)
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c.Status(200)
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}
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func (srv *HISServer) UpdateSubscription(c *gin.Context) {
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var payload struct {
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Active bool `json:"active"`
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Patient uint `json:"patient"`
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}
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c.BindJSON(&payload)
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serviceID := c.Param("id")
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service := &model.Service{}
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if err := srv.data.Where("id = ?", serviceID).Preload("ServiceProvider").Preload("ServiceProvider.AuthConfig").Find(service).Error; err != nil {
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c.AbortWithError(404, err)
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return
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}
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sub := &model.Patient{}
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srv.data.Model(service).Where("id = ?", payload.Patient).Association("Subscriptions").Find(sub)
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if payload.Active && sub.ID != 0 {
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log.Printf("No update needed: %v %v", payload.Patient, service.ServiceID)
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c.Status(200)
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return
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} else if !payload.Active && sub.ID == 0 {
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log.Printf("No update needed: %v %v", payload.Patient, service.ServiceID)
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c.Status(200)
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return
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}
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patient := &model.Patient{}
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if err := srv.data.Where("id = ?", payload.Patient).Find(patient).Error; err != nil {
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c.AbortWithError(404, err)
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return
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}
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if srv.applyPolicy(payload.Active, service) {
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resp, err := srv.subscribePatients(service.ServiceProvider, service, []model.Patient{*patient})
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if err != nil {
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log.Println("err: %v", err)
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c.AbortWithError(400, err)
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return
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}
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for _, result := range resp.Results {
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if result.Error != nil {
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log.Printf("Error for subscriptions")
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c.AbortWithStatusJSON(http.StatusBadRequest, map[string]string{"error": result.Error.Message})
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return
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}
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}
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} else {
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resp, err := srv.unsubscribePatients(service.ServiceProvider, service, []model.Patient{*patient})
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if err != nil {
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log.Println("err: %v", err)
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c.AbortWithError(400, err)
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return
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}
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for _, result := range resp.Results {
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if result.Error != nil {
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log.Printf("Error for subscriptions")
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c.AbortWithStatusJSON(http.StatusBadRequest, map[string]string{"error": result.Error.Message})
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return
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}
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}
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}
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if payload.Active {
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srv.data.Model(service).Association("Subscriptions").Append(patient)
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} else {
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srv.data.Model(service).Association("Subscriptions").Delete(patient)
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}
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c.Status(201)
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}
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func (srv *HISServer) NewServiceProvider(c *gin.Context) {
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var payload struct {
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URL string `json:"url"`
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}
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c.BindJSON(&payload)
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conn, err := srv.register(payload.URL)
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if err != nil {
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c.AbortWithError(400, err)
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return
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}
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c.JSON(201, conn)
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}
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|
|
func (srv *HISServer) ActivateServiceProvider(c *gin.Context) {
|
|
connID := c.Param("id")
|
|
|
|
connection := &model.ServiceProvider{}
|
|
|
|
if err := srv.data.Preload("AuthConfig").Where("id = ?", connID).First(connection).Error; err != nil {
|
|
c.AbortWithError(404, err)
|
|
return
|
|
}
|
|
|
|
var payload struct {
|
|
PSK string `json:"psk"`
|
|
}
|
|
|
|
c.BindJSON(&payload)
|
|
|
|
conn, err := srv.activate(connection, payload.PSK)
|
|
|
|
if err != nil {
|
|
c.AbortWithError(400, err)
|
|
return
|
|
}
|
|
|
|
c.JSON(201, conn)
|
|
}
|
|
|
|
func (srv *HISServer) GetPatient(c *gin.Context) {
|
|
id := c.Param("id")
|
|
patient := &model.Patient{}
|
|
|
|
if err := srv.data.Where("patient_id = ?", id).First(patient).Error; err == nil {
|
|
serviceAny, _ := c.Get("authenticatedService")
|
|
service, _ := serviceAny.(*model.Service)
|
|
|
|
subscribed := srv.data.Raw(
|
|
"select * from service_patients where service_id = ? and patient_id = ?",
|
|
service.ID,
|
|
patient.ID,
|
|
).Scan(&map[string]interface{}{}).RowsAffected > 0
|
|
|
|
if !srv.applyPolicy(subscribed, service) {
|
|
c.Status(http.StatusUnauthorized)
|
|
return
|
|
}
|
|
|
|
f, err := os.Open(path.Join("./patients", patient.FileBase+".edi"))
|
|
if err != nil {
|
|
c.Error(err)
|
|
return
|
|
}
|
|
|
|
io.Copy(c.Writer, f)
|
|
return
|
|
}
|
|
|
|
c.JSON(404, nil)
|
|
}
|
|
|
|
func (srv *HISServer) GetFHIRPatient(c *gin.Context) {
|
|
id := c.Query("id")
|
|
patient := &model.Patient{}
|
|
if err := srv.data.Where("patient_id = ?", id).First(patient).Error; err == nil {
|
|
serviceAny, _ := c.Get("authenticatedService")
|
|
service, _ := serviceAny.(*model.Service)
|
|
|
|
subscribed := srv.data.Raw(
|
|
"select * from service_patients where service_id = ? and patient_id = ?",
|
|
service.ID,
|
|
patient.ID,
|
|
).Scan(&map[string]interface{}{}).RowsAffected > 0
|
|
|
|
if !srv.applyPolicy(subscribed, service) {
|
|
c.Status(http.StatusUnauthorized)
|
|
return
|
|
}
|
|
|
|
f, err := os.Open(path.Join("./patients", patient.FileBase+".fhir.json"))
|
|
if err != nil {
|
|
c.Error(err)
|
|
return
|
|
}
|
|
|
|
io.Copy(c.Writer, f)
|
|
return
|
|
}
|
|
|
|
c.JSON(404, nil)
|
|
}
|
|
|
|
func NewServer(apiAddr, uiAddr string) *HISServer {
|
|
cert := loadCert()
|
|
srv := &HISServer{
|
|
apiSrv: &http.Server{
|
|
Addr: apiAddr,
|
|
Handler: gin.Default(),
|
|
TLSConfig: &tls.Config{
|
|
ClientAuth: tls.RequestClientCert,
|
|
GetCertificate: func(*tls.ClientHelloInfo) (*tls.Certificate, error) {
|
|
return cert, nil
|
|
},
|
|
},
|
|
},
|
|
uiSrv: &http.Server{
|
|
Addr: uiAddr,
|
|
Handler: gin.Default(),
|
|
TLSConfig: &tls.Config{
|
|
GetCertificate: func(*tls.ClientHelloInfo) (*tls.Certificate, error) {
|
|
return cert, nil
|
|
},
|
|
},
|
|
},
|
|
clientCert: *cert,
|
|
}
|
|
|
|
return srv
|
|
}
|
|
|